STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F18E9.1Uncharacterized protein. (179 aa)    
Predicted Functional Partners:
R02E12.4
Uncharacterized protein.
   
    0.562
K08E7.6
Uncharacterized protein.
   
    0.553
nhr-54
Nuclear hormone receptor family member nhr-54; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
   
    0.542
C01F1.4
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.538
nlp-60
Neuropeptide-Like Protein.
   
    0.538
cutl-20
ZP domain-containing protein.
   
    0.538
str-9
Seven TM Receptor.
   
    0.538
igcm-2
ImmunoGlobulin-like Cell adhesion Molecule family.
   
    0.538
srx-39
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.537
D2023.3
C2 domain-containing protein.
   
    0.536
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.