STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F19B10.6Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
F49E11.7
Serine/threonine-protein phosphatase.
   
  
 0.852
K09F6.9
Uncharacterized protein.
      
 0.850
Y54E10BR.3
RING-type domain-containing protein.
      
 0.850
ZK1236.9
Uncharacterized protein.
      
 0.850
Y71H2AM.4
Uncharacterized protein.
      
 0.811
B0393.6
RING-type domain-containing protein.
      
 0.810
gmn-1
Geminin homolog.
      
 0.700
ubc-25
Ubiquitin-conjugating enzyme E2 25; Catalyzes the covalent attachment of ubiquitin to other proteins (Potential). Required for the maintenance of neuromuscular function.
      
 0.697
dcp-66
Deacetylase Complex Protein.
      
 0.618
lin-36
Protein lin-36; Required to negatively regulate vulval development. Antagonizes Ras-mediated vulval induction. Acts cell autonomously.
      
 0.590
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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