STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F19C7.1Uncharacterized protein. (266 aa)    
Predicted Functional Partners:
Y34B4A.9
Uncharacterized protein.
   
   0.898
T20D3.2
Uncharacterized protein.
   
   0.756
Y34B4A.6
Uncharacterized protein.
   
   0.741
LLC1.2
Uncharacterized protein.
   
  
0.738
T25C12.3
Uncharacterized protein.
   
   0.700
F28B4.3
Uncharacterized protein.
   
   0.694
irg-7
Protein irg-7; Plays a role in innate immunity, probably via the atf-7 pathway, to confer resistance to pathogenic bacteria. May also play a role in the regulation of longevity.
   
   0.648
lec-9
Galectin.
   
    0.641
C26B9.5
Uncharacterized protein.
 
 
    0.602
lec-10
Galectin.
   
    0.597
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.