STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F19F10.9Uncharacterized protein. (829 aa)    
Predicted Functional Partners:
rbm-25
PWI domain-containing protein.
   
 
 0.998
prp-31
Nop domain-containing protein.
   
 0.998
prp-6
Yeast PRP (Splicing factor) related.
   
 0.998
prp-3
Yeast PRP (Splicing factor) related.
   
 0.997
eftu-2
Tr-type G domain-containing protein.
   
 0.997
snu-23
Putative zinc finger matrin-type protein snu-23.
   
 0.997
M28.5
NHP2-like protein 1 homolog; Binds to the 5'-stem-loop of U4 snRNA and may play a role in the late stage of spliceosome assembly. The protein undergoes a conformational change upon RNA-binding (By similarity); Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.996
Y54G2A.75
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.996
prp-4
WD_REPEATS_REGION domain-containing protein.
   
 0.995
mfap-1
Microfibrillar-associated protein 1; Involved in pre-mRNA splicing.
   
 
 0.995
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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