Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| csr-1 | elli-1 | F20D12.1a.1 | F20C5.3b.1 | Piwi domain-containing protein. | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | 0.686 |
| csr-1 | glh-2 | F20D12.1a.1 | C55B7.1.1 | Piwi domain-containing protein. | ATP-dependent RNA helicase glh-2; Probable ATP-binding RNA helicase. | 0.407 |
| csr-1 | glh-3 | F20D12.1a.1 | B0414.6.1 | Piwi domain-containing protein. | ATP-dependent RNA helicase glh-3; Probable ATP-binding RNA helicase; Belongs to the DEAD box helicase family. DDX4/VASA subfamily. | 0.446 |
| csr-1 | glh-4 | F20D12.1a.1 | T12F5.3.1 | Piwi domain-containing protein. | ATP-dependent RNA helicase glh-4; Probable ATP-binding RNA helicase. May act redundantly with the P-granule component glh-1 to regulate the formation of the granular structure of P-granules in embryos. May protect somatic cells from excessive apoptosis during normal development. | 0.526 |
| csr-1 | pgl-3 | F20D12.1a.1 | C18G1.4a.1 | Piwi domain-containing protein. | Guanyl-specific ribonuclease pgl-3; Guanyl-specific endoribonuclease which cleaves the phosphodiester bond in single-stranded RNA between the 3'-guanylic residue and the 5'-OH residue of adjacent nucleotide, resulting in the formation of a corresponding 2',3'-cyclic phosphate intermediate. P-granule component involved in germline development. Together with the P-granule component pgl-1, is involved in the formation of P-granules. Together with pgl- 1, probably recruits other granule components such as pos-1, mex-3 and glh-1, and RNA to P-granules. In vitro, binds mRNA; this interaction [...] | 0.475 |
| csr-1 | ppw-2 | F20D12.1a.1 | Y110A7A.18.1 | Piwi domain-containing protein. | Piwi-like protein; Belongs to the argonaute family. | 0.533 |
| csr-1 | sago-2 | F20D12.1a.1 | F56A6.1a.1 | Piwi domain-containing protein. | Piwi-like protein; Belongs to the argonaute family. | 0.525 |
| elli-1 | csr-1 | F20C5.3b.1 | F20D12.1a.1 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | Piwi domain-containing protein. | 0.686 |
| elli-1 | glh-2 | F20C5.3b.1 | C55B7.1.1 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | ATP-dependent RNA helicase glh-2; Probable ATP-binding RNA helicase. | 0.578 |
| elli-1 | glh-3 | F20C5.3b.1 | B0414.6.1 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | ATP-dependent RNA helicase glh-3; Probable ATP-binding RNA helicase; Belongs to the DEAD box helicase family. DDX4/VASA subfamily. | 0.719 |
| elli-1 | glh-4 | F20C5.3b.1 | T12F5.3.1 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | ATP-dependent RNA helicase glh-4; Probable ATP-binding RNA helicase. May act redundantly with the P-granule component glh-1 to regulate the formation of the granular structure of P-granules in embryos. May protect somatic cells from excessive apoptosis during normal development. | 0.566 |
| elli-1 | ksr-1 | F20C5.3b.1 | F13B9.5.2 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | Kinase suppressor of Ras A; Serine/threonine-protein kinase which positively regulates Ras-mediated signaling probably acting at the level of let-60/ras or/and lin-45/raf. Involved in sex myoblast migration. Plays a role in responses to M.nematophilum-mediated bacterial infection by promoting tail swelling and preventing constipation. Functions redundantly with ksr-2 in the Ras-mediated regulation of larval survival, the development of excretory canal and in mpk-1 phosphorylation in somatic cells. In addition, involved in determining vulval precursor cell fate during vulval induction i [...] | 0.534 |
| elli-1 | patr-1 | F20C5.3b.1 | F43G6.9.1 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | Protein PAT1 homolog 1; RNA-binding protein involved in deadenylation-dependent decapping of mRNAs, leading to the degradation of mRNAs. Acts as a scaffold protein that connects deadenylation and decapping machinery (By similarity); Belongs to the PAT1 family. | 0.700 |
| elli-1 | pgl-3 | F20C5.3b.1 | C18G1.4a.1 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | Guanyl-specific ribonuclease pgl-3; Guanyl-specific endoribonuclease which cleaves the phosphodiester bond in single-stranded RNA between the 3'-guanylic residue and the 5'-OH residue of adjacent nucleotide, resulting in the formation of a corresponding 2',3'-cyclic phosphate intermediate. P-granule component involved in germline development. Together with the P-granule component pgl-1, is involved in the formation of P-granules. Together with pgl- 1, probably recruits other granule components such as pos-1, mex-3 and glh-1, and RNA to P-granules. In vitro, binds mRNA; this interaction [...] | 0.474 |
| elli-1 | ppw-2 | F20C5.3b.1 | Y110A7A.18.1 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | Piwi-like protein; Belongs to the argonaute family. | 0.675 |
| elli-1 | rde-11 | F20C5.3b.1 | B0564.11.1 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | RNA interference defective protein 11; In complex with rde-10, required in the endogenous and exogenous siRNA pathway for biogenesis and accumulation of secondary small interfering RNA (siRNA) intermediates, such as 22G-siRNAs derived from ergo-1 targets. | 0.668 |
| elli-1 | sago-2 | F20C5.3b.1 | F56A6.1a.1 | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | Piwi-like protein; Belongs to the argonaute family. | 0.492 |
| glh-2 | csr-1 | C55B7.1.1 | F20D12.1a.1 | ATP-dependent RNA helicase glh-2; Probable ATP-binding RNA helicase. | Piwi domain-containing protein. | 0.407 |
| glh-2 | elli-1 | C55B7.1.1 | F20C5.3b.1 | ATP-dependent RNA helicase glh-2; Probable ATP-binding RNA helicase. | Enlarged germline granules protein 1; Plays a role in modulating RNAi activity and P-granule accumulation in the germline. May function in association with CSR-1 complex components such as drh-3 to regulate RNA transcript accumulation in germ cells. | 0.578 |
| glh-2 | glh-3 | C55B7.1.1 | B0414.6.1 | ATP-dependent RNA helicase glh-2; Probable ATP-binding RNA helicase. | ATP-dependent RNA helicase glh-3; Probable ATP-binding RNA helicase; Belongs to the DEAD box helicase family. DDX4/VASA subfamily. | 0.505 |
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