STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F20D12.2PCI domain-containing protein. (1116 aa)    
Predicted Functional Partners:
R08D7.5
Uncharacterized calcium-binding protein R08D7.5.
   
 
 0.994
dss-1
Probable 26S proteasome complex subunit dss-1; Subunit of the 26S proteasome which plays a role in ubiquitin-dependent proteolysis. Has an essential role in oogenesis and larval growth. Required for intestinal function and default lifespan.
    
 
 0.960
C27F2.10
PCI domain-containing protein 2 homolog; Belongs to the CSN12 family.
   
 0.951
nxf-2
Nuclear RNA export factor 2; May be involved in the export of cellular mRNA to the cytoplasm; Belongs to the NXF family.
   
 
 0.909
nxf-1
Nuclear RNA export factor 1; Involved in RNA export from the nucleus to the cytoplasm; Belongs to the NXF family.
    
 
 0.908
npp-11
Nuclear Pore complex Protein.
   
 
 0.880
ceh-19
Homeobox protein ceh-19.
      
 0.809
C27F2.7
Uncharacterized F-box protein C27F2.7.
   
 
 0.782
thoc-2
THO Complex (Transcription factor/nuclear export) subunit.
   
 
 0.758
mcm-3
MCM domain-containing protein; Belongs to the MCM family.
   
 
 0.750
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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