Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| T19D12.4 | col-99 | T19D12.4a.1 | F29C4.8j.1 | VWFA domain-containing protein. | Putative cuticle collagen 99; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.400 |
| T19D12.4 | emb-9 | T19D12.4a.1 | K04H4.1a.1 | VWFA domain-containing protein. | Collagen alpha-1(IV) chain; Collagen type IV is specific for basement membranes (Probable). Required to restrict presynaptic growth at the neuromuscular junctions (NMJ) in late larval stage and in adult motor neurons. May play a role in axon regeneration in embryos following injury in D-type motor neurons. | 0.427 |
| T19D12.4 | srp-8 | T19D12.4a.1 | F20D6.3.1 | VWFA domain-containing protein. | SERPIN domain-containing protein; Belongs to the serpin family. | 0.516 |
| bath-38 | dpy-2 | F52H3.3.1 | T14B4.6.1 | BTB and MATH domain-containing protein 38. | Cuticle collagen dpy-2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-2 affects the body shape. | 0.669 |
| bath-38 | eng-1 | F52H3.3.1 | F01F1.10b.1 | BTB and MATH domain-containing protein 38. | Glyco_hydro_85 domain-containing protein. | 0.531 |
| bath-38 | epg-5 | F52H3.3.1 | C56C10.12.1 | BTB and MATH domain-containing protein 38. | Ectopic P granules protein 5; Involved in the maturation of autophagosomes into autolysosomes during starvation-induced autotrophy. Specifically, involved in the clearance of apoptotic cells by promoting the delivery of engulfed apoptotic cells to the lysosome. | 0.665 |
| bath-38 | srp-8 | F52H3.3.1 | F20D6.3.1 | BTB and MATH domain-containing protein 38. | SERPIN domain-containing protein; Belongs to the serpin family. | 0.970 |
| col-99 | T19D12.4 | F29C4.8j.1 | T19D12.4a.1 | Putative cuticle collagen 99; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | VWFA domain-containing protein. | 0.400 |
| col-99 | emb-9 | F29C4.8j.1 | K04H4.1a.1 | Putative cuticle collagen 99; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | Collagen alpha-1(IV) chain; Collagen type IV is specific for basement membranes (Probable). Required to restrict presynaptic growth at the neuromuscular junctions (NMJ) in late larval stage and in adult motor neurons. May play a role in axon regeneration in embryos following injury in D-type motor neurons. | 0.828 |
| col-99 | srp-8 | F29C4.8j.1 | F20D6.3.1 | Putative cuticle collagen 99; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | SERPIN domain-containing protein; Belongs to the serpin family. | 0.516 |
| dpy-2 | bath-38 | T14B4.6.1 | F52H3.3.1 | Cuticle collagen dpy-2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-2 affects the body shape. | BTB and MATH domain-containing protein 38. | 0.669 |
| dpy-2 | srp-8 | T14B4.6.1 | F20D6.3.1 | Cuticle collagen dpy-2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. Mutations in dpy-2 affects the body shape. | SERPIN domain-containing protein; Belongs to the serpin family. | 0.702 |
| emb-9 | T19D12.4 | K04H4.1a.1 | T19D12.4a.1 | Collagen alpha-1(IV) chain; Collagen type IV is specific for basement membranes (Probable). Required to restrict presynaptic growth at the neuromuscular junctions (NMJ) in late larval stage and in adult motor neurons. May play a role in axon regeneration in embryos following injury in D-type motor neurons. | VWFA domain-containing protein. | 0.427 |
| emb-9 | col-99 | K04H4.1a.1 | F29C4.8j.1 | Collagen alpha-1(IV) chain; Collagen type IV is specific for basement membranes (Probable). Required to restrict presynaptic growth at the neuromuscular junctions (NMJ) in late larval stage and in adult motor neurons. May play a role in axon regeneration in embryos following injury in D-type motor neurons. | Putative cuticle collagen 99; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity). | 0.828 |
| emb-9 | srp-8 | K04H4.1a.1 | F20D6.3.1 | Collagen alpha-1(IV) chain; Collagen type IV is specific for basement membranes (Probable). Required to restrict presynaptic growth at the neuromuscular junctions (NMJ) in late larval stage and in adult motor neurons. May play a role in axon regeneration in embryos following injury in D-type motor neurons. | SERPIN domain-containing protein; Belongs to the serpin family. | 0.516 |
| eng-1 | bath-38 | F01F1.10b.1 | F52H3.3.1 | Glyco_hydro_85 domain-containing protein. | BTB and MATH domain-containing protein 38. | 0.531 |
| eng-1 | srp-8 | F01F1.10b.1 | F20D6.3.1 | Glyco_hydro_85 domain-containing protein. | SERPIN domain-containing protein; Belongs to the serpin family. | 0.620 |
| epg-5 | bath-38 | C56C10.12.1 | F52H3.3.1 | Ectopic P granules protein 5; Involved in the maturation of autophagosomes into autolysosomes during starvation-induced autotrophy. Specifically, involved in the clearance of apoptotic cells by promoting the delivery of engulfed apoptotic cells to the lysosome. | BTB and MATH domain-containing protein 38. | 0.665 |
| epg-5 | srp-8 | C56C10.12.1 | F20D6.3.1 | Ectopic P granules protein 5; Involved in the maturation of autophagosomes into autolysosomes during starvation-induced autotrophy. Specifically, involved in the clearance of apoptotic cells by promoting the delivery of engulfed apoptotic cells to the lysosome. | SERPIN domain-containing protein; Belongs to the serpin family. | 0.693 |
| ile-1 | nsf-1 | K07A1.8.2 | H15N14.2a.1 | L-type lectin-like domain-containing protein. | Vesicle-fusing ATPase; Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seems to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin (By similarity); Belongs to the AAA ATPase family. | 0.541 |
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