STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nas-24Zinc metalloproteinase nas-24; Metalloprotease. (396 aa)    
Predicted Functional Partners:
scl-9
SCP domain-containing protein; Belongs to the CRISP family.
   
    0.610
scl-15
SCP domain-containing protein; Belongs to the CRISP family.
   
    0.602
C16C8.19
Uncharacterized protein.
   
    0.592
clec-197
C-type lectin domain-containing protein.
   
    0.592
F59B2.12
Uncharacterized protein F59B2.12.
   
    0.592
K12H6.4
Uncharacterized protein.
   
    0.592
clec-136
C-type LECtin.
   
    0.587
tag-329
Uncharacterized protein; Belongs to the peptidase C1 family.
   
    0.585
K12H6.9
Uncharacterized protein.
   
    0.585
C48B4.12
Uncharacterized protein.
   
    0.584
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.