Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ekl-5 | rde-2 | Y26E6A.1.1 | F21C3.4a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.777 |
ekl-5 | rde-4 | Y26E6A.1.1 | T20G5.11.1 | Uncharacterized protein. | RNA interference promoting factor. | 0.404 |
mut-14 | mut-15 | C14C11.6.1 | T01C3.8a.1 | MUTator; Belongs to the DEAD box helicase family. | MUTator. | 0.943 |
mut-14 | mut-16 | C14C11.6.1 | B0379.3a.1 | MUTator; Belongs to the DEAD box helicase family. | MUTator. | 0.947 |
mut-14 | mut-2 | C14C11.6.1 | K04F10.6a.1 | MUTator; Belongs to the DEAD box helicase family. | NTP_transf_2 domain-containing protein. | 0.903 |
mut-14 | mut-7 | C14C11.6.1 | ZK1098.8.1 | MUTator; Belongs to the DEAD box helicase family. | Exonuclease mut-7; Represses the transposition of Tc1, Tc3, Tc4, and Tc5, perhaps by degrading transposon-specific messages. Also affects sperm development, sensitivity to RNAi of mainly germline expressed genes, silencing of some germline transgenes, X chromosome loss, and is required for cosuppression (functional silencing of chromosomal loci induced by transgenes) and for silencing induced by antisense RNA oligomers. | 0.870 |
mut-14 | rde-1 | C14C11.6.1 | K08H10.7.1 | MUTator; Belongs to the DEAD box helicase family. | RNA interference promoting factor RDE-1. | 0.645 |
mut-14 | rde-2 | C14C11.6.1 | F21C3.4a.1 | MUTator; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.865 |
mut-14 | rde-4 | C14C11.6.1 | T20G5.11.1 | MUTator; Belongs to the DEAD box helicase family. | RNA interference promoting factor. | 0.541 |
mut-14 | rrf-1 | C14C11.6.1 | F26A3.8a.1 | MUTator; Belongs to the DEAD box helicase family. | RNA-dependent RNA polymerase Family. | 0.832 |
mut-15 | mut-14 | T01C3.8a.1 | C14C11.6.1 | MUTator. | MUTator; Belongs to the DEAD box helicase family. | 0.943 |
mut-15 | mut-16 | T01C3.8a.1 | B0379.3a.1 | MUTator. | MUTator. | 0.947 |
mut-15 | mut-2 | T01C3.8a.1 | K04F10.6a.1 | MUTator. | NTP_transf_2 domain-containing protein. | 0.938 |
mut-15 | mut-7 | T01C3.8a.1 | ZK1098.8.1 | MUTator. | Exonuclease mut-7; Represses the transposition of Tc1, Tc3, Tc4, and Tc5, perhaps by degrading transposon-specific messages. Also affects sperm development, sensitivity to RNAi of mainly germline expressed genes, silencing of some germline transgenes, X chromosome loss, and is required for cosuppression (functional silencing of chromosomal loci induced by transgenes) and for silencing induced by antisense RNA oligomers. | 0.889 |
mut-15 | rde-2 | T01C3.8a.1 | F21C3.4a.1 | MUTator. | Uncharacterized protein. | 0.771 |
mut-15 | rrf-1 | T01C3.8a.1 | F26A3.8a.1 | MUTator. | RNA-dependent RNA polymerase Family. | 0.815 |
mut-15 | smut-1 | T01C3.8a.1 | Y38A10A.6.1 | MUTator. | Synthetic MUTator. | 0.908 |
mut-16 | mut-14 | B0379.3a.1 | C14C11.6.1 | MUTator. | MUTator; Belongs to the DEAD box helicase family. | 0.947 |
mut-16 | mut-15 | B0379.3a.1 | T01C3.8a.1 | MUTator. | MUTator. | 0.947 |
mut-16 | mut-2 | B0379.3a.1 | K04F10.6a.1 | MUTator. | NTP_transf_2 domain-containing protein. | 0.929 |
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