STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptc-2SSD domain-containing protein. (667 aa)    
Predicted Functional Partners:
algn-7
Asparagine Linked Glycosylation (ALG) homolog, Nematode.
      
 0.805
F30B5.4
Uncharacterized protein F30B5.4; Belongs to the OKL38 family.
      
 0.697
cyk-7
Cytokinesis defective protein 7.
      
 0.667
ppm-1.D
PPM-type phosphatase domain-containing protein.
   
  
 0.542
wrt-5
Warthog protein 5; Intercellular signal essential for a variety of patterning events during development.
   
 
 0.468
wrt-9
WaRThog (Hedgehog-like family).
   
 
 0.465
wrt-8
Warthog protein 8 C-product; Intercellular signal essential for a variety of patterning events during development.
   
 
 0.465
hog-1
HOG only (Hedgehog Hog domain alone).
   
 
 0.465
wrt-7
WaRThog (Hedgehog-like family).
   
 
 0.465
wrt-1
Warthog protein 1 C-product; Intercellular signal essential for a variety of patterning events during development.
   
 
 0.465
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.