STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srh-98Serpentine Receptor, class H. (169 aa)    
Predicted Functional Partners:
K05C4.3
Uncharacterized protein.
      
 0.961
Y14H12A.1
Uncharacterized protein.
      
 0.961
Y17G9B.8
SGF29 C-terminal domain-containing protein.
      
 0.912
pals-23
Protein containing ALS2cr12 (ALS2CR12) signature.
      
 0.810
bath-29
BTB and MATH domain containing.
      
 0.810
F42A6.5
BRCT domain-containing protein.
      
 0.810
F10D2.8
Uncharacterized protein.
      
 0.809
K06G5.1
VWFA domain-containing protein.
      
 0.699
ddo-1
D-aspartate oxidase 1; Selectively catalyzes the oxidative deamination of D- aspartate and its N-methylated derivative, N-methyl D-aspartate. Highest catalytic efficiency for D-Glu followed by D-Asp and NMDA. May play a role in the egg-laying events and early development of the worm, in addition to quality control of the germ cells. Belongs to the DAMOX/DASOX family.
      
 0.610
sdz-24
OB domain-containing protein.
      
 0.581
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (22%) [HD]