STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilys-5Invertebrate LYSozyme. (139 aa)    
Predicted Functional Partners:
dct-16
DAF-16/FOXO Controlled, germline Tumor affecting.
   
 
 0.777
spp-17
Saposin B-type domain-containing protein.
   
  
 0.763
lys-4
LYSozyme.
   
 
 0.760
lys-1
Lysozyme-like protein 1; Involved in resistance to Gram-negative bacterium S.marcescens and to bacterium Gram-positive S.aureus infection.
   
  
 0.728
clec-218
C-type LECtin.
   
  
 0.708
folt-2
Folate-like transporter 2; Unlike folt-1, does not appear to act as a folate transporter; Belongs to the reduced folate carrier (RFC) transporter (TC 2.A.48) family.
   
  
 0.694
C17D12.3
Uncharacterized protein.
      
 0.693
Y47H9A.1
annotation not available
      
 0.693
Y38E10A.14
Uncharacterized protein.
      
 0.691
lys-10
LYSozyme.
   
  
 0.679
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.