STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F22B5.5DUF1248 domain-containing protein. (332 aa)    
Predicted Functional Partners:
K06A5.2
Uncharacterized protein.
   
    0.593
F07A5.2
Uncharacterized protein.
   
    0.592
smz-2
Sperm Meiosis PDZ domain containing proteins.
   
    0.592
C15C6.2
Uncharacterized protein.
   
    0.590
Y106G6H.13
Uncharacterized protein.
   
    0.581
F32B6.4
Uncharacterized protein.
   
    0.573
F26F4.2
Uncharacterized protein.
   
    0.562
C39H7.1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.561
F36A2.10
Uncharacterized protein.
   
    0.559
sss-1
Sperm-Specific family, class S.
   
    0.556
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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