STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ceh-38Homeobox protein ceh-38; Probable DNA-binding regulatory protein involved in cell-fate specification. (646 aa)    
Predicted Functional Partners:
dhhc-4
Zinc finger DHHC domain-containing protein 4.
    
 
 0.735
nhr-273
Nuclear Hormone Receptor family.
    
 
 0.731
F26H9.2
Uncharacterized protein.
   
  
 0.692
hlh-32
BHLH domain-containing protein.
   
  
 0.686
ceh-75
Homeobox domain-containing protein.
      
 0.668
ceh-90
Homeobox domain-containing protein.
      
 0.667
C27F2.1
WD Repeat protein.
   
  
 0.660
Y47G6A.7
TPT domain-containing protein.
      
 0.660
ceh-9
Homeobox protein ceh-9.
      
 0.660
ceh-87
Homeobox domain-containing protein.
      
 0.648
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.