STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgp-12p-GlycoProtein related. (1318 aa)    
Predicted Functional Partners:
T28H11.8
Uncharacterized protein.
   
  
 0.711
avr-15
Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.673
pgp-10
p-GlycoProtein related.
  
 
0.655
pgp-11
p-GlycoProtein related.
  
 
0.627
pgp-9
p-GlycoProtein related.
  
 
0.614
avr-14
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.613
pgp-5
p-GlycoProtein related.
  
 
0.612
haf-6
HAlF transporter (PGP related).
  
 
0.611
haf-7
HAlF transporter (PGP related).
  
 
0.609
pgp-3
Multidrug resistance protein pgp-3; Mediates ATP-dependent export of organic anions and xenobiotics from the cytoplasm. Hydrolyzes ATP with low efficiency (By similarity); Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
  
 
0.607
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.