STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F22E12.1Uncharacterized protein. (763 aa)    
Predicted Functional Partners:
Y106G6H.14
Uncharacterized protein.
      
 0.850
chw-1
CHp/Wrch Rho-like protein homolog.
   
  
 0.818
ephx-1
EPHeXin (Eph-interacting GEF) homolog.
    
 
 0.815
sdpn-1
SynDaPiN (Synaptic dynamin binding protein) homolog.
      
 0.698
Y32F6A.5
Uncharacterized protein; Belongs to the peptidase S10 family.
 
 
    0.695
unc-26
Synaptojanin; Probable inositol 5-phosphatase which regulates synaptic vesicle recycling in neurons by regulating clathrin-mediated endocytosis; In the central section; belongs to the inositol 1,4,5- trisphosphate 5-phosphatase family.
      
 0.463
osm-6
Osm-6 protein.
    
 
 0.423
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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