STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F22E5.12BTB domain-containing protein. (139 aa)    
Predicted Functional Partners:
C30E1.4
Uncharacterized protein.
   
   0.596
srh-243
Serpentine Receptor, class H.
   
   0.596
srsx-2
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.592
str-9
Seven TM Receptor.
   
    0.592
F58F6.6
Uncharacterized protein.
   
    0.592
srsx-21
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.592
Y22D7AR.14
WSN domain-containing protein.
   
    0.592
sre-5
Serpentine Receptor, class E (Epsilon).
   
   0.589
ZK380.4
Uncharacterized protein.
   
    0.581
str-134
Seven TM Receptor.
   
    0.573
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.