STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clec-1C-type lectin domain-containing protein. (173 aa)    
Predicted Functional Partners:
clec-180
C-type lectin domain-containing protein 180.
      
 0.891
clec-2
C-type LECtin.
      
 0.810
clec-160
C-type lectin domain-containing protein 160.
   
  
 0.779
C54G4.4
Uncharacterized protein.
      
 0.758
clec-78
C-type LECtin.
    
 
 0.725
lmd-4
LysM Domain (Peptidoglycan binding) protein.
      
 0.661
clec-266
C-type lectin domain-containing protein.
      
 0.660
clec-41
C-type LECtin.
   
  
 0.657
clec-49
C-type LECtin.
   
  
 0.587
clec-39
C-type LECtin.
      
 0.584
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: medium (54%) [HD]