Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F17C8.6 | nlf-1 | F17C8.6.1 | F55A4.2.1 | Uncharacterized protein. | NCA Localization Factor. | 0.718 |
F17C8.6 | unc-79 | F17C8.6.1 | E03A3.6a.1 | Uncharacterized protein. | Uncoordinated protein 79. | 0.934 |
F17C8.6 | unc-80 | F17C8.6.1 | F25C8.3d.1 | Uncharacterized protein. | Protein unc-80; Probable component of the nca-1 sodium channel complex, a cation channel that regulates neuronal activity by transmitting depolarization signals to synapses. Regulates the transition from slow to rapid forms of locomotion. Required for localization of nca-1 along axons and in non-synaptic regions. Contributes to endocytosis defects in synaptojanin mutants. Involved in the control of anasthetic response to halothane. | 0.845 |
nca-2 | nlf-1 | C27F2.2a.1 | F55A4.2.1 | Four domain-type voltage-gated ion channel alpha-1 subunit. | NCA Localization Factor. | 0.943 |
nca-2 | unc-2 | C27F2.2a.1 | T02C5.5p.1 | Four domain-type voltage-gated ion channel alpha-1 subunit. | EF-hand domain-containing protein. | 0.423 |
nca-2 | unc-7 | C27F2.2a.1 | R07D5.1d.1 | Four domain-type voltage-gated ion channel alpha-1 subunit. | Innexin unc-7; Structural component of the gap junctions (By similarity). Required for coordinated locomotion. Probably by regulating neuronal transmission downstream of lin-3 and receptor lin- 23 and phospholipase plc-3 in ALA neurons, involved in the decrease in pharyngeal pumping during the quiescent state that precedes each larval molt. | 0.684 |
nca-2 | unc-79 | C27F2.2a.1 | E03A3.6a.1 | Four domain-type voltage-gated ion channel alpha-1 subunit. | Uncoordinated protein 79. | 0.993 |
nca-2 | unc-80 | C27F2.2a.1 | F25C8.3d.1 | Four domain-type voltage-gated ion channel alpha-1 subunit. | Protein unc-80; Probable component of the nca-1 sodium channel complex, a cation channel that regulates neuronal activity by transmitting depolarization signals to synapses. Regulates the transition from slow to rapid forms of locomotion. Required for localization of nca-1 along axons and in non-synaptic regions. Contributes to endocytosis defects in synaptojanin mutants. Involved in the control of anasthetic response to halothane. | 0.984 |
nca-2 | unc-9 | C27F2.2a.1 | R12H7.1a.1 | Four domain-type voltage-gated ion channel alpha-1 subunit. | Innexin unc-9; Structural component of the gap junctions. Belongs to the pannexin family. | 0.523 |
nlf-1 | F17C8.6 | F55A4.2.1 | F17C8.6.1 | NCA Localization Factor. | Uncharacterized protein. | 0.718 |
nlf-1 | nca-2 | F55A4.2.1 | C27F2.2a.1 | NCA Localization Factor. | Four domain-type voltage-gated ion channel alpha-1 subunit. | 0.943 |
nlf-1 | unc-1 | F55A4.2.1 | K03E6.5b.1 | NCA Localization Factor. | Protein unc-1. | 0.506 |
nlf-1 | unc-2 | F55A4.2.1 | T02C5.5p.1 | NCA Localization Factor. | EF-hand domain-containing protein. | 0.521 |
nlf-1 | unc-77 | F55A4.2.1 | C11D2.6m.1 | NCA Localization Factor. | Uncharacterized protein. | 0.713 |
nlf-1 | unc-79 | F55A4.2.1 | E03A3.6a.1 | NCA Localization Factor. | Uncoordinated protein 79. | 0.999 |
nlf-1 | unc-80 | F55A4.2.1 | F25C8.3d.1 | NCA Localization Factor. | Protein unc-80; Probable component of the nca-1 sodium channel complex, a cation channel that regulates neuronal activity by transmitting depolarization signals to synapses. Regulates the transition from slow to rapid forms of locomotion. Required for localization of nca-1 along axons and in non-synaptic regions. Contributes to endocytosis defects in synaptojanin mutants. Involved in the control of anasthetic response to halothane. | 0.961 |
nlf-1 | unc-9 | F55A4.2.1 | R12H7.1a.1 | NCA Localization Factor. | Innexin unc-9; Structural component of the gap junctions. Belongs to the pannexin family. | 0.441 |
twk-2 | unc-79 | T12C9.3a.1 | E03A3.6a.1 | TWiK family of potassium channels; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. | Uncoordinated protein 79. | 0.687 |
twk-2 | unc-80 | T12C9.3a.1 | F25C8.3d.1 | TWiK family of potassium channels; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. | Protein unc-80; Probable component of the nca-1 sodium channel complex, a cation channel that regulates neuronal activity by transmitting depolarization signals to synapses. Regulates the transition from slow to rapid forms of locomotion. Required for localization of nca-1 along axons and in non-synaptic regions. Contributes to endocytosis defects in synaptojanin mutants. Involved in the control of anasthetic response to halothane. | 0.708 |
unc-1 | nlf-1 | K03E6.5b.1 | F55A4.2.1 | Protein unc-1. | NCA Localization Factor. | 0.506 |
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