STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F25D7.5EGF-like domain-containing protein. (1216 aa)    
Predicted Functional Partners:
F31F7.2
VWFA domain-containing protein.
    
 
 0.947
F26C11.3
Uncharacterized protein F26C11.3.
   
  
 0.912
clec-164
C-type lectin domain-containing protein.
    
 
 0.862
trf-2
MATH domain-containing protein.
    
 
 0.856
F28A12.3
Uncharacterized protein.
      
 0.819
F14D7.11
Uncharacterized protein.
      
 0.818
trf-1
TNF Receptor Associated Factor (TRAF) homolog.
    
 
 0.768
F59A6.3
Sushi domain-containing protein.
   
 
 0.743
egas-1
EGF plus ASC domain ion channel; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.698
asic-2
Degenerin-like protein asic-2.
      
 0.662
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: medium (54%) [HD]