STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F25E5.2Uncharacterized protein. (338 aa)    
Predicted Functional Partners:
C04F1.1
Methyltransf_21 domain-containing protein.
   
  
 0.867
T07G12.3
Uncharacterized protein.
   
  
 0.849
R07B1.5
Uncharacterized protein R07B1.5.
   
  
 0.836
C18A11.4
Uncharacterized protein.
      
 0.816
grd-2
GRounDhog (Hedgehog-like family).
   
  
 0.741
col-71
Col_cuticle_N domain-containing protein.
   
  
 0.700
col-38
Col_cuticle_N domain-containing protein.
      
 0.697
col-138
Col_cuticle_N domain-containing protein.
      
 0.692
col-49
Col_cuticle_N domain-containing protein.
   
  
 0.670
dao-4
Dauer or Aging adult Overexpression.
   
  
 0.667
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.