STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F25E5.9Uncharacterized protein. (119 aa)    
Predicted Functional Partners:
C14C6.13
Uncharacterized protein.
   
    0.550
F36H9.1
Activin_recp domain-containing protein.
   
    0.547
F13A2.5
Uncharacterized protein.
   
    0.538
F46B3.15
Uncharacterized protein.
   
    0.537
F54F2.6
Uncharacterized protein F54F2.6.
   
    0.507
B0524.3
WSN domain-containing protein.
   
    0.463
math-13
MATH (Meprin-associated Traf homology) domain containing.
   
    0.463
srbc-22
Serpentine Receptor, class BC (Class B-like).
   
    0.461
Y81B9A.1
Uncharacterized protein.
   
    0.461
glct-2
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
   
    0.457
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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