Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C18B12.6 | F08D12.7 | C18B12.6.1 | F08D12.7.1 | Uncharacterized protein. | Uncharacterized protein. | 0.850 |
C18B12.6 | M60.6 | C18B12.6.1 | M60.6.1 | Uncharacterized protein. | Uncharacterized protein. | 0.820 |
C18B12.6 | cdh-4 | C18B12.6.1 | F25F2.2.1 | Uncharacterized protein. | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | 0.619 |
C18B12.6 | rbc-1 | C18B12.6.1 | F54E4.1b.1 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.802 |
F08D12.7 | C18B12.6 | F08D12.7.1 | C18B12.6.1 | Uncharacterized protein. | Uncharacterized protein. | 0.850 |
F08D12.7 | M60.6 | F08D12.7.1 | M60.6.1 | Uncharacterized protein. | Uncharacterized protein. | 0.850 |
F08D12.7 | cdh-4 | F08D12.7.1 | F25F2.2.1 | Uncharacterized protein. | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | 0.660 |
F08D12.7 | rbc-1 | F08D12.7.1 | F54E4.1b.1 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.805 |
M60.6 | C18B12.6 | M60.6.1 | C18B12.6.1 | Uncharacterized protein. | Uncharacterized protein. | 0.820 |
M60.6 | F08D12.7 | M60.6.1 | F08D12.7.1 | Uncharacterized protein. | Uncharacterized protein. | 0.850 |
M60.6 | cdh-4 | M60.6.1 | F25F2.2.1 | Uncharacterized protein. | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | 0.581 |
M60.6 | rbc-1 | M60.6.1 | F54E4.1b.1 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.758 |
cdh-4 | C18B12.6 | F25F2.2.1 | C18B12.6.1 | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | Uncharacterized protein. | 0.619 |
cdh-4 | F08D12.7 | F25F2.2.1 | F08D12.7.1 | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | Uncharacterized protein. | 0.660 |
cdh-4 | M60.6 | F25F2.2.1 | M60.6.1 | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | Uncharacterized protein. | 0.581 |
cdh-4 | egl-20 | F25F2.2.1 | W08D2.1.1 | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | Wnt homolog. | 0.668 |
cdh-4 | fmi-1 | F25F2.2.1 | F15B9.7a.1 | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | FlaMIngo (Cadherin plus 7TM domain) homolog. | 0.715 |
cdh-4 | mig-13 | F25F2.2.1 | F43C9.4a.2 | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | Abnormal cell migration protein 13; Probable receptor that acts as an upstream signaling protein to promote the guidance, migration and positioning of the right Q neuroblast (QR) and its descendants along the anteroposterior body axis, and also the anterior migration of BDU interneurons during larval development. Associates with and recruits the downstream components tyrosine kinase abl-1 and the tyrosine kinase adapter protein sem-5 to the leading edge of migrating Q neuroblasts and their descendants to activate signaling through the two parallel wve-1 and wsp-1 pathways, respectively [...] | 0.629 |
cdh-4 | mig-21 | F25F2.2.1 | F01F1.13a.1 | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | Abnormal cell migration protein 21; Required for determination of left/right asymmetry in nervous system. Acts together with unc-40 to control an initial left-right asymmetric polarization of the Q neuroblasts. Mig-21 and unc-40 may control the asymmetry in Wnt signaling response by restricting posterior polarization to one of the 2 Q neuroblasts. Involved in left- side QL posterior migration. In right-side QR, unc-40 and mig-21 pathways mutually inhibit each other in posterior migration, allowing anterior QR migration. | 0.820 |
cdh-4 | ptp-3 | F25F2.2.1 | C09D8.1j.1 | Cadherin-4; Potential calcium-dependent cell-adhesion protein that controls axon guidance in the ventral cord. | Tyrosine-protein phosphatase Lar-like; Has a role in early neural and epidermal development; neuroblast movements during closure of the gastrulation cleft and epidermal morphogenesis. Vab-1 and ptp-3 may function redundantly within the same sets of neuronal precursors. | 0.869 |
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