STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F25H2.12Methyltranfer_dom domain-containing protein. (478 aa)    
Predicted Functional Partners:
set-29
SET domain-containing protein.
   
  
 0.541
F32A7.4
MEthylTransferase Like.
   
  
 0.512
ZK512.2
Probable ATP-dependent RNA helicase DDX55 homolog; Probable ATP-binding RNA helicase.
   
    0.459
C38D4.9
MTS domain-containing protein.
   
  
 0.455
ZK512.11
Uncharacterized protein.
   
    0.434
C18B12.4
RING-type domain-containing protein.
    
 
 0.433
T03G11.3
Zinc finger C2HC domain-containing protein T03G11.3; Belongs to the ZC2HC1 family.
    
 
 0.431
W03F8.3
Probable peptide chain release factor 1, mitochondrial; Mitochondrial peptide chain release factor that directs the termination of translation in response to the peptide chain termination codons UAA and UAG.
   
  
 0.428
F29B9.1
Protein-lysine N-methyltransferase CELE_F29B9.1; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
      
 0.422
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.