STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F25H2.3ANK_REP_REGION domain-containing protein. (316 aa)    
Predicted Functional Partners:
srx-116
7TM_GPCR_Srx domain-containing protein.
   
    0.592
Y116A8C.11
Uncharacterized protein Y116A8C.11.
   
    0.576
str-115
Seven TM Receptor.
   
    0.571
C47C12.2
annotation not available
   
    0.553
E03H4.5
Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.
   
    0.553
nhr-169
Nuclear hormone receptor family member nhr-169; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
   
    0.551
str-246
Seven TM Receptor.
   
    0.551
F41C6.2
annotation not available
   
    0.550
srh-206
Serpentine Receptor, class H.
   
    0.550
math-23
MATH (Meprin-associated Traf homology) domain containing.
   
    0.549
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.