STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl-54Mitochondrial Ribosomal Protein, Large. (133 aa)    
Predicted Functional Partners:
mrpl-47
Mitochondrial Ribosomal Protein, Large.
   
 
 0.977
mrps-33
Mitochondrial Ribosomal Protein, Small.
   
 
 0.969
mrpl-23
Probable 39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.969
mrps-22
Mitochondrial Ribosomal Protein, Small.
   
 
 0.963
mrpl-41
39S ribosomal protein L41, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL41 family.
   
 
 0.953
mrpl-17
Mitochondrial Ribosomal Protein, Large.
   
 
 0.953
mrps-16
Probable 28S ribosomal protein S16, mitochondrial; Belongs to the bacterial ribosomal protein bS16 family.
   
   0.950
mrpl-34
L51_S25_CI-B8 domain-containing protein.
   
 
 0.948
Y55F3BL.4
SRR1 domain-containing protein.
   
 
 0.945
mrpl-32
Probable 39S ribosomal protein L32, mitochondrial.
   
 
 0.937
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.