STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F25H5.7Protein-tyrosine-phosphatase. (490 aa)    
Predicted Functional Partners:
F26E4.5
Tyrosine-protein kinase.
   
   0.489
C17H12.3
Tyrosine-protein phosphatase.
  
 
0.428
ZK354.8
Tyrosine-protein phosphatase.
  
 
0.427
R09E10.1
Uncharacterized protein.
   
   0.426
F36H12.3
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
   0.406
spe-26
Spermatocyte protein spe-26; May play a role in the spermatocyte cytoskeleton, possibly interacting with actin.
   
    0.403
H32C10.1
Uncharacterized protein.
   
    0.400
ZK484.7
Tyrosine-protein phosphatase.
  
 
0.400
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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