STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F25H9.6Flavoprotein domain-containing protein. (237 aa)    
Predicted Functional Partners:
pnk-4
Pantothenate kinase; Belongs to the type II pantothenate kinase family.
     
 0.998
Y65B4A.8
CTP_transf_like domain-containing protein.
   
 0.993
Y71H2AM.6
Uncharacterized protein.
   
 0.993
bpl-1
BPL/LPL catalytic domain-containing protein.
  
 
 0.894
pnk-1
PaNtothenate Kinase.
     
 0.889
lntl-1
LIN-24 (Twenty-four) Like.
   
 
 0.887
R10H10.6
Flavokinase domain-containing protein.
  
  
 0.874
T05G5.5
Uncharacterized protein T05G5.5; Belongs to the CoaE family.
  
 0.834
dut-1
Deoxyuridinetriphosphatase.
  
  
 0.802
coq-6
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6; Belongs to the UbiH/COQ6 family.
      
 0.743
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.