STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F26G1.1Uncharacterized protein. (941 aa)    
Predicted Functional Partners:
R08E3.3
Uncharacterized protein.
    
 
 0.891
vps-29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.872
C16A11.2
KOG2701 domain-containing protein.
   
 
 0.828
T28F2.2
Uncharacterized protein.
    
 
 0.715
C31E10.5
KOG2701 domain-containing protein.
   
 
 0.638
C31E10.6
KOG2701 domain-containing protein.
   
 
 0.620
rbg-3
Rab-GAP TBC domain-containing protein.
   
  
 0.543
C50F4.4
Uncharacterized protein.
   
 
 0.536
F26G1.15
Uncharacterized protein.
 
      0.518
C34B7.2
SAC domain-containing protein.
   
  
 0.510
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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