Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ccz-1 | eea-1 | F58G11.6.1 | T10G3.5a.1 | Uncharacterized protein. | FYVE-type domain-containing protein. | 0.739 |
| ccz-1 | rab-5 | F58G11.6.1 | F26H9.6.1 | Uncharacterized protein. | RAB family. | 0.968 |
| ccz-1 | rabs-5 | F58G11.6.1 | Y42H9AR.3b.1 | Uncharacterized protein. | FYVE-type domain-containing protein. | 0.554 |
| ccz-1 | rme-6 | F58G11.6.1 | F49E7.1a.1 | Uncharacterized protein. | Receptor-mediated endocytosis protein 6; Acts both as a GTPase-activating protein (GAP) and a guanine nucleotide exchange factor (GEF), and participates in endocytosis. Acts by regulating the activation of rab-5 by exchanging bound GDP for free GTP at clathrin coated pits. | 0.445 |
| ccz-1 | sand-1 | F58G11.6.1 | F41H10.11.2 | Uncharacterized protein. | SAND endocytosis protein family. | 0.999 |
| ccz-1 | vps-16 | F58G11.6.1 | C05D11.2.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes which are proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion (By similarity). The HOPS complex is proposed to be recruited to rab-7 on the la [...] | 0.991 |
| ccz-1 | vps-18 | F58G11.6.1 | W06B4.3.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 18 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes which are proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion (By similarity). The HOPS complex is proposed to be recruited to [...] | 0.991 |
| ccz-1 | vps-34 | F58G11.6.1 | B0025.1a.1 | Uncharacterized protein. | Phosphatidylinositol 3-kinase catalytic subunit type 3; Catalytic subunit of the PI3K complex that mediates formation of phosphatidylinositol 3-phosphate. Together with bec-1, mediates the production of phosphatidylinositol 3-phosphate on intracellular vesicles and thereby regulates membrane trafficking. Plays a role in endosome-to-Golgi retrograde transport of mig-14. Involved in clearance of apoptotic cell corpses by phagosomes. Phagosome maturation requires two sequential and non-overlapping pulses of phosphatidylinositol-3-phosphate (PI3P) on the vesicle surface which mediates recr [...] | 0.812 |
| ccz-1 | vps-39 | F58G11.6.1 | T08G5.5b.1 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 39 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways (By similarity). Believed to act in part as a component of the putative HOPS endosomal tethering complex which is proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion. The HOPS complex is proposed to be recruited to rab-7 on th [...] | 0.994 |
| ccz-1 | vps-8 | F58G11.6.1 | C42C1.4a.1 | Uncharacterized protein. | Vps8 domain-containing protein. | 0.914 |
| eea-1 | ccz-1 | T10G3.5a.1 | F58G11.6.1 | FYVE-type domain-containing protein. | Uncharacterized protein. | 0.739 |
| eea-1 | rab-5 | T10G3.5a.1 | F26H9.6.1 | FYVE-type domain-containing protein. | RAB family. | 0.999 |
| eea-1 | rabs-5 | T10G3.5a.1 | Y42H9AR.3b.1 | FYVE-type domain-containing protein. | FYVE-type domain-containing protein. | 0.404 |
| eea-1 | rme-6 | T10G3.5a.1 | F49E7.1a.1 | FYVE-type domain-containing protein. | Receptor-mediated endocytosis protein 6; Acts both as a GTPase-activating protein (GAP) and a guanine nucleotide exchange factor (GEF), and participates in endocytosis. Acts by regulating the activation of rab-5 by exchanging bound GDP for free GTP at clathrin coated pits. | 0.581 |
| eea-1 | sand-1 | T10G3.5a.1 | F41H10.11.2 | FYVE-type domain-containing protein. | SAND endocytosis protein family. | 0.689 |
| eea-1 | vps-16 | T10G3.5a.1 | C05D11.2.1 | FYVE-type domain-containing protein. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes which are proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion (By similarity). The HOPS complex is proposed to be recruited to rab-7 on the la [...] | 0.492 |
| eea-1 | vps-18 | T10G3.5a.1 | W06B4.3.1 | FYVE-type domain-containing protein. | Vacuolar protein sorting-associated protein 18 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes which are proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion (By similarity). The HOPS complex is proposed to be recruited to [...] | 0.590 |
| eea-1 | vps-34 | T10G3.5a.1 | B0025.1a.1 | FYVE-type domain-containing protein. | Phosphatidylinositol 3-kinase catalytic subunit type 3; Catalytic subunit of the PI3K complex that mediates formation of phosphatidylinositol 3-phosphate. Together with bec-1, mediates the production of phosphatidylinositol 3-phosphate on intracellular vesicles and thereby regulates membrane trafficking. Plays a role in endosome-to-Golgi retrograde transport of mig-14. Involved in clearance of apoptotic cell corpses by phagosomes. Phagosome maturation requires two sequential and non-overlapping pulses of phosphatidylinositol-3-phosphate (PI3P) on the vesicle surface which mediates recr [...] | 0.972 |
| eea-1 | vps-39 | T10G3.5a.1 | T08G5.5b.1 | FYVE-type domain-containing protein. | Vacuolar protein sorting-associated protein 39 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways (By similarity). Believed to act in part as a component of the putative HOPS endosomal tethering complex which is proposed to be involved in the rab-5-to-rab-7 endosome conversion probably implicating sand-1, and via binding SNAREs and SNARE complexes to mediate tethering and docking events during SNARE-mediated membrane fusion. The HOPS complex is proposed to be recruited to rab-7 on th [...] | 0.576 |
| rab-5 | ccz-1 | F26H9.6.1 | F58G11.6.1 | RAB family. | Uncharacterized protein. | 0.968 |
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