STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spp-18Saposin B-type domain-containing protein. (126 aa)    
Predicted Functional Partners:
spp-19
Activin_recp domain-containing protein.
   
  
 0.852
fbxa-59
F-box domain-containing protein.
   
  
 0.763
clec-150
C-type lectin domain-containing protein.
   
  
 0.738
lys-1
Lysozyme-like protein 1; Involved in resistance to Gram-negative bacterium S.marcescens and to bacterium Gram-positive S.aureus infection.
   
  
 0.708
gst-38
Glutathione S-Transferase.
   
  
 0.707
clec-5
C-type LECtin.
   
  
 0.683
clec-173
C-type lectin domain-containing protein.
   
  
 0.671
fbxa-165
F-box domain-containing protein.
      
 0.665
clec-190
C-type LECtin.
   
  
 0.661
spp-8
SaPosin-like Protein family.
   
  
 0.626
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.