STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F27D9.2MFS domain-containing protein. (498 aa)    
Predicted Functional Partners:
T19D12.9
MFS domain-containing protein.
   
  
 0.901
Y19D10A.11
annotation not available
      
 0.896
slc-17.9
MFS domain-containing protein.
      
 0.891
F56A4.12
MFS domain-containing protein.
      
 0.854
K09E9.1
MFS domain-containing protein.
   
  
 0.830
C52B9.4
Uncharacterized protein.
   
  
 0.810
T16G1.3
CHK domain-containing protein.
      
 0.810
C34D4.4
Uncharacterized Golgi apparatus membrane protein-like protein C34D4.4.
      
 0.804
twk-8
TWiK family of potassium channels; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
  
 0.773
cyp-33C4
CYtochrome P450 family; Belongs to the cytochrome P450 family.
   
  
 0.763
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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