STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhs-29DeHydrogenases, Short chain. (427 aa)    
Predicted Functional Partners:
F17A9.4
Oxidored_FMN domain-containing protein.
  
 
 0.899
pks-1
PolyKetide Synthase.
  
 0.839
fmo-1
Dimethylaniline monooxygenase [N-oxide-forming].
   
  
 0.818
ugt-43
UDP-GlucuronosylTransferase.
    
 
 0.813
ugt-53
UDP-GlucuronosylTransferase.
   
 
 0.813
ugt-39
UDP-GlucuronosylTransferase.
    
 
 0.750
gst-36
Probable glutathione S-transferase gst-36; Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles; Belongs to the GST superfamily. Sigma family.
   
  
 0.740
asg-2
Probable ATP synthase subunit g 2, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism [...]
   
 
 0.710
ugt-6
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
    
 
 0.707
ugt-13
UDP-GlucuronosylTransferase.
    
 
 0.706
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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