Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F28F8.7 | F28F8.9 | F28F8.7a.1 | F28F8.9b.1 | ELM2 domain-containing protein. | Uncharacterized protein. | 0.929 |
F28F8.7 | F44B9.8 | F28F8.7a.1 | F44B9.8.1 | ELM2 domain-containing protein. | Probable replication factor C subunit 5; The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. | 0.805 |
F28F8.7 | atx-3 | F28F8.7a.1 | F28F8.6.1 | ELM2 domain-containing protein. | Ataxin-3 homolog; Acts as chain editing deubiquitinating enzyme that binds and cleaves 'Lys-48'-linked polyubiquitin chains, with a preference for chains containing four or more ubiquitin molecules thereby modulating protein degradation by the ubiquitin-proteasome pathway. Probably by regulating the IGF-1-insulin-like pathway, regulates lifespan. Regulates germline DNA double-strand-break repair and apoptosis in response to DNA damage by recruiting E4 ubiquitin- protein ligase ufd-2 to DNA repair foci. Interacts with key regulators of transcription and represses transcription (By simil [...] | 0.549 |
F28F8.7 | mdt-28 | F28F8.7a.1 | F28F8.5b.1 | ELM2 domain-containing protein. | Coiled-coil domain-containing protein mdt-28; Plays a role in normal growth and development. | 0.850 |
F28F8.7 | mdt-30 | F28F8.7a.1 | F44B9.7.1 | ELM2 domain-containing protein. | Glutamine/asparagine-rich protein mdt-30. | 0.466 |
F28F8.7 | srb-11 | F28F8.7a.1 | F23F12.10.1 | ELM2 domain-containing protein. | Serpentine receptor class beta-11. | 0.759 |
F28F8.9 | F28F8.7 | F28F8.9b.1 | F28F8.7a.1 | Uncharacterized protein. | ELM2 domain-containing protein. | 0.929 |
F28F8.9 | F44B9.8 | F28F8.9b.1 | F44B9.8.1 | Uncharacterized protein. | Probable replication factor C subunit 5; The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. | 0.815 |
F28F8.9 | atx-3 | F28F8.9b.1 | F28F8.6.1 | Uncharacterized protein. | Ataxin-3 homolog; Acts as chain editing deubiquitinating enzyme that binds and cleaves 'Lys-48'-linked polyubiquitin chains, with a preference for chains containing four or more ubiquitin molecules thereby modulating protein degradation by the ubiquitin-proteasome pathway. Probably by regulating the IGF-1-insulin-like pathway, regulates lifespan. Regulates germline DNA double-strand-break repair and apoptosis in response to DNA damage by recruiting E4 ubiquitin- protein ligase ufd-2 to DNA repair foci. Interacts with key regulators of transcription and represses transcription (By simil [...] | 0.573 |
F28F8.9 | mdt-28 | F28F8.9b.1 | F28F8.5b.1 | Uncharacterized protein. | Coiled-coil domain-containing protein mdt-28; Plays a role in normal growth and development. | 0.857 |
F28F8.9 | mdt-30 | F28F8.9b.1 | F44B9.7.1 | Uncharacterized protein. | Glutamine/asparagine-rich protein mdt-30. | 0.479 |
F28F8.9 | srb-11 | F28F8.9b.1 | F23F12.10.1 | Uncharacterized protein. | Serpentine receptor class beta-11. | 0.759 |
F44B9.8 | F28F8.7 | F44B9.8.1 | F28F8.7a.1 | Probable replication factor C subunit 5; The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. | ELM2 domain-containing protein. | 0.805 |
F44B9.8 | F28F8.9 | F44B9.8.1 | F28F8.9b.1 | Probable replication factor C subunit 5; The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. | Uncharacterized protein. | 0.815 |
F44B9.8 | mdt-28 | F44B9.8.1 | F28F8.5b.1 | Probable replication factor C subunit 5; The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. | Coiled-coil domain-containing protein mdt-28; Plays a role in normal growth and development. | 0.862 |
F44B9.8 | mdt-30 | F44B9.8.1 | F44B9.7.1 | Probable replication factor C subunit 5; The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. | Glutamine/asparagine-rich protein mdt-30. | 0.821 |
F44B9.8 | srb-11 | F44B9.8.1 | F23F12.10.1 | Probable replication factor C subunit 5; The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. | Serpentine receptor class beta-11. | 0.759 |
atx-3 | F28F8.7 | F28F8.6.1 | F28F8.7a.1 | Ataxin-3 homolog; Acts as chain editing deubiquitinating enzyme that binds and cleaves 'Lys-48'-linked polyubiquitin chains, with a preference for chains containing four or more ubiquitin molecules thereby modulating protein degradation by the ubiquitin-proteasome pathway. Probably by regulating the IGF-1-insulin-like pathway, regulates lifespan. Regulates germline DNA double-strand-break repair and apoptosis in response to DNA damage by recruiting E4 ubiquitin- protein ligase ufd-2 to DNA repair foci. Interacts with key regulators of transcription and represses transcription (By simil [...] | ELM2 domain-containing protein. | 0.549 |
atx-3 | F28F8.9 | F28F8.6.1 | F28F8.9b.1 | Ataxin-3 homolog; Acts as chain editing deubiquitinating enzyme that binds and cleaves 'Lys-48'-linked polyubiquitin chains, with a preference for chains containing four or more ubiquitin molecules thereby modulating protein degradation by the ubiquitin-proteasome pathway. Probably by regulating the IGF-1-insulin-like pathway, regulates lifespan. Regulates germline DNA double-strand-break repair and apoptosis in response to DNA damage by recruiting E4 ubiquitin- protein ligase ufd-2 to DNA repair foci. Interacts with key regulators of transcription and represses transcription (By simil [...] | Uncharacterized protein. | 0.573 |
atx-3 | mdt-28 | F28F8.6.1 | F28F8.5b.1 | Ataxin-3 homolog; Acts as chain editing deubiquitinating enzyme that binds and cleaves 'Lys-48'-linked polyubiquitin chains, with a preference for chains containing four or more ubiquitin molecules thereby modulating protein degradation by the ubiquitin-proteasome pathway. Probably by regulating the IGF-1-insulin-like pathway, regulates lifespan. Regulates germline DNA double-strand-break repair and apoptosis in response to DNA damage by recruiting E4 ubiquitin- protein ligase ufd-2 to DNA repair foci. Interacts with key regulators of transcription and represses transcription (By simil [...] | Coiled-coil domain-containing protein mdt-28; Plays a role in normal growth and development. | 0.400 |
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