STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srj-22Serpentine Receptor, class J. (342 aa)    
Predicted Functional Partners:
srt-29
Serpentine Receptor, class T.
   
  
 0.935
srt-45
Serpentine Receptor, class T.
   
  
 0.902
srd-17
Serpentine Receptor, class D (Delta).
   
  
 0.870
srab-16
Serpentine Receptor, class AB (Class A-like).
   
  
 0.861
srd-5
Serpentine Receptor, class D (Delta).
   
  
 0.853
srt-28
Serpentine Receptor, class T.
      
 0.850
srt-47
Serpentine Receptor, class T.
      
 0.850
srt-7
Serpentine Receptor, class T.
      
 0.816
sre-4
Serpentine Receptor, class E (Epsilon).
   
  
 0.813
srsx-37
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
  
 0.812
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.