STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqn-32DB domain-containing protein. (592 aa)    
Predicted Functional Partners:
pqn-27
Prion-like-(Q/N-rich)-domain-bearing protein.
    
 
 0.820
pqn-18
Prion-like-(Q/N-rich)-domain-bearing protein.
   
  
 0.817
pqn-87
MATH domain-containing protein.
    
 
 0.817
ttr-23
TransThyretin-Related family domain.
      
 0.810
fbxb-75
F-box domain-containing protein.
      
 0.806
R13A5.11
Serine/threonine-protein phosphatase.
    
 
 0.785
grl-7
Ground-like domain-containing protein.
   
   0.777
pqn-51
Prion-like-(Q/N-rich)-domain-bearing protein.
      
 0.759
pqn-52
Prion-like-(Q/N-rich)-domain-bearing protein.
      
 0.758
reps-1
REPS (RalBP1-associated Eps domain-containing protein) homolog.
    
 
 0.755
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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