STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hlh-28BHLH domain-containing protein. (239 aa)    
Predicted Functional Partners:
madf-9
MADF domain-containing protein.
      
 0.808
pals-30
Protein containing ALS2cr12 (ALS2CR12) signature.
      
 0.758
zip-11
BZIP domain-containing protein.
      
 0.660
ceh-48
One cut domain family member.
      
 0.550
B0554.1
Uncharacterized protein.
      
 0.470
C03H5.5
Uncharacterized protein.
      
 0.470
C49A1.1
Uncharacterized protein.
      
 0.470
msrp-1
MS Related Protein.
      
 0.470
F36H12.3
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
      
 0.470
R09A1.2
BTB domain-containing protein.
      
 0.470
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.