STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F32A5.3Serine carboxypeptidase ctsa-3.1; Belongs to the peptidase S10 family. (574 aa)    
Predicted Functional Partners:
pho-1
Intestinal acid phosphatase; Acid phosphatase required for normal growth and development. Specifically required for normal gut differentiation.
   
  
 0.542
pcp-2
Prolyl Carboxy Peptidase like.
   
  
 0.459
mlc-1
Myosin regulatory light chain 1.
  
 
 0.451
Y16B4A.2
Carboxypeptidase; Belongs to the peptidase S10 family.
   
   
0.437
bgal-2
Glyco_hydro_35 domain-containing protein; Belongs to the glycosyl hydrolase 35 family.
   
 
 0.433
asp-2
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 
 0.433
mlc-2
Myosin regulatory light chain 2.
  
 
 0.430
vha-6
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
   
  
 0.413
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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