STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mccc-1MethylCrotonoyl-Coenzyme A Carboxylase (Alpha). (671 aa)    
Predicted Functional Partners:
F02A9.10
Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; Carboxyltransferase subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3- methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism; Belongs to the AccD/PCCB family.
 
 0.999
pccb-1
Propionyl Coenzyme A Carboxylase Beta subunit.
 
 0.999
ivd-1
Isovaleryl-CoA dehydrogenase.
  
 0.990
ech-5
Enoyl-CoA Hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.974
ech-6
Probable enoyl-CoA hydratase, mitochondrial.
  
 0.964
ech-1.2
Enoyl-CoA Hydratase.
  
 0.959
bpl-1
BPL/LPL catalytic domain-containing protein.
    
 0.958
ech-7
Enoyl-CoA Hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.957
ech-1.1
Enoyl-CoA Hydratase.
  
 0.956
acdh-8
Acyl CoA DeHydrogenase.
  
 
 0.952
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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