Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F32B6.3 | F37C12.1 | F32B6.3.1 | F37C12.1.1 | SFM domain-containing protein. | Uncharacterized protein. | 0.944 |
F32B6.3 | K07C5.6 | F32B6.3.1 | K07C5.6.1 | SFM domain-containing protein. | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | 0.996 |
F32B6.3 | bud-31 | F32B6.3.1 | C07A9.2.1 | SFM domain-containing protein. | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | 0.975 |
F32B6.3 | cdc-5L | F32B6.3.1 | D1081.8.1 | SFM domain-containing protein. | Cell Division Cycle related. | 0.985 |
F32B6.3 | eftu-2 | F32B6.3.1 | ZK328.2.1 | SFM domain-containing protein. | Tr-type G domain-containing protein. | 0.924 |
F32B6.3 | isy-1 | F32B6.3.1 | F53B7.3.2 | SFM domain-containing protein. | Protein isy-1; Regulates the processing of the mir-60 microRNA (miRNA), which in turn negatively regulates the expression of the transcription factor zip-10. Does not affect the splicing of zip-10 ; Belongs to the ISY1 family. | 0.922 |
F32B6.3 | mog-1 | F32B6.3.1 | K03H1.2.2 | SFM domain-containing protein. | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1; Probable ATP-binding RNA helicase involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DEAH subfamily. PRP16 sub-subfamily. | 0.923 |
F32B6.3 | prp-17 | F32B6.3.1 | F49D11.1.2 | SFM domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.965 |
F32B6.3 | prp-8 | F32B6.3.1 | C50C3.6.1 | SFM domain-containing protein. | Pre-mRNA-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.970 |
F32B6.3 | snrp-200 | F32B6.3.1 | Y46G5A.4.1 | SFM domain-containing protein. | Putative U5 small nuclear ribonucleoprotein 200 kDa helicase; Putative RNA helicase involved in the second step of RNA splicing; Belongs to the helicase family. SKI2 subfamily. | 0.984 |
F37C12.1 | F32B6.3 | F37C12.1.1 | F32B6.3.1 | Uncharacterized protein. | SFM domain-containing protein. | 0.944 |
F37C12.1 | K07C5.6 | F37C12.1.1 | K07C5.6.1 | Uncharacterized protein. | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | 0.934 |
F37C12.1 | bud-31 | F37C12.1.1 | C07A9.2.1 | Uncharacterized protein. | Protein BUD31 homolog; Involved in pre-mRNA splicing process. | 0.992 |
F37C12.1 | cdc-5L | F37C12.1.1 | D1081.8.1 | Uncharacterized protein. | Cell Division Cycle related. | 0.995 |
F37C12.1 | eftu-2 | F37C12.1.1 | ZK328.2.1 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.951 |
F37C12.1 | isy-1 | F37C12.1.1 | F53B7.3.2 | Uncharacterized protein. | Protein isy-1; Regulates the processing of the mir-60 microRNA (miRNA), which in turn negatively regulates the expression of the transcription factor zip-10. Does not affect the splicing of zip-10 ; Belongs to the ISY1 family. | 0.956 |
F37C12.1 | mog-1 | F37C12.1.1 | K03H1.2.2 | Uncharacterized protein. | Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1; Probable ATP-binding RNA helicase involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DEAH subfamily. PRP16 sub-subfamily. | 0.998 |
F37C12.1 | prp-17 | F37C12.1.1 | F49D11.1.2 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.983 |
F37C12.1 | prp-8 | F37C12.1.1 | C50C3.6.1 | Uncharacterized protein. | Pre-mRNA-splicing factor 8 homolog; Functions as a scaffold that mediates the ordered assembly of spliceosomal proteins and snRNAs. Required for the assembly of the U4/U6-U5 tri-snRNP complex. Functions as scaffold that positions spliceosomal U2, U5 and U6 snRNAs at splice sites on pre-mRNA substrates, so that splicing can occur. Interacts with both the 5' and the 3' splice site. | 0.939 |
F37C12.1 | snrp-200 | F37C12.1.1 | Y46G5A.4.1 | Uncharacterized protein. | Putative U5 small nuclear ribonucleoprotein 200 kDa helicase; Putative RNA helicase involved in the second step of RNA splicing; Belongs to the helicase family. SKI2 subfamily. | 0.991 |
page 1 of 6