STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F33G12.6PPM-type phosphatase domain-containing protein. (771 aa)    
Predicted Functional Partners:
C40H1.2
Uncharacterized protein C40H1.2.
      
 0.850
F46F5.11
Uncharacterized protein.
      
 0.850
R10F2.6
Tyrosine-protein phosphatase domain-containing protein.
      
 0.850
ZC84.6
Uncharacterized protein.
   
  
 0.812
C14B1.3
Uncharacterized protein.
      
 0.810
upb-1
CN hydrolase domain-containing protein.
     
 0.810
ZK1307.8
Uncharacterized protein.
      
 0.808
F23F12.3
Uncharacterized protein F23F12.3.
    
 
 0.807
tat-4
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 
 0.756
pgl-2
P granule abnormality protein 2; Transient component of P-granule which is involved in germline development.
      
 0.741
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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