STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srd-1Serpentine receptor class delta-1. (371 aa)    
Predicted Functional Partners:
srj-54
Serpentine Receptor, class J.
   
  
 0.815
str-3
Seven TM Receptor.
      
 0.806
str-2
Seven transmembrane receptor 2.
   
  
 0.756
snet-1
Protein snet-1; Negatively regulates chemotaxis and olfactory plasticity which is the change from positive chemotaxis to dispersal after prolonged exposure to an odorant. May be down-regulated in response to pheromone exposure, resulting in promotion of olfactory plasticity.
      
 0.699
srj-1
Serpentine Receptor, class J.
      
 0.698
srh-2
Serpentine Receptor, class H.
      
 0.697
odr-10
Serpentine receptor class r-10; An odorant receptor which affects chemotaxis to the volatile odorant diacetyl. Specifies AWA neuronal cell fate via the odr-7 pathway; Belongs to the nematode receptor-like protein str family.
      
 0.660
sra-3
Serpentine receptor class alpha-3.
      
 0.617
srh-34
Serpentine Receptor, class H.
      
 0.614
sre-2
Serpentine receptor class epsilon-2.
      
 0.589
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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