STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nspf-1Nematode Specific Peptide family, group F. (87 aa)    
Predicted Functional Partners:
nspd-8
Nematode Specific Peptide family, group D.
   
  
 0.921
nspd-9
Nematode Specific Peptide family, group D.
   
  
 0.919
nspd-6
Nematode Specific Peptide family, group D.
      
 0.917
nspd-5
Nematode Specific Peptide family, group D.
      
 0.917
nspd-10
Nematode Specific Peptide family, group D.
   
  
 0.917
nspd-1
Nematode Specific Peptide family, group D.
      
 0.917
nspd-4
Nematode Specific Peptide family, group D.
      
 0.892
nspd-7
Nematode Specific Peptide family, group D.
      
 0.891
nspd-3
Nematode Specific Peptide family, group D.
      
 0.810
nspd-2
Nematode Specific Peptide family, group D.
      
 0.810
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.