STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abu-10Activated in Blocked Unfolded protein response. (375 aa)    
Predicted Functional Partners:
abu-11
Activated in Blocked Unfolded protein response.
   
 
 0.924
abu-1
Activated in Blocked Unfolded protein response.
   
 
 0.912
abu-6
Activated in Blocked Unfolded protein response.
   
 
 0.906
abu-7
Activated in Blocked Unfolded protein response.
   
 
 0.861
nspb-10
Nematode Specific Peptide family, group B.
   
  
 0.806
nas-30
Zinc metalloproteinase nas-30; Metalloprotease.
   
  
 0.793
abu-8
Activated in Blocked Unfolded protein response.
   
 
0.780
pqn-74
Chitin-binding type-2 domain-containing protein.
   
  
 0.743
sdz-37
SKN-1 Dependent Zygotic transcript.
      
 0.741
clec-218
C-type LECtin.
      
 0.698
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.