STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clec-62VWFA domain-containing protein. (389 aa)    
Predicted Functional Partners:
ZK1320.2
Uncharacterized protein ZK1320.2.
   
  
 0.937
F54D5.3
Uncharacterized protein.
   
  
 0.913
clec-173
C-type lectin domain-containing protein.
   
 
 0.858
clec-186
C-type LECtin.
   
 
 0.843
spp-8
SaPosin-like Protein family.
   
  
 0.810
clec-150
C-type lectin domain-containing protein.
   
 
 0.781
lys-8
LYSozyme.
   
  
 0.765
clec-145
C-type lectin domain-containing protein.
   
 
 0.734
clec-210
C-type LECtin.
    
 
 0.725
clec-5
C-type LECtin.
   
 
 0.722
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.