STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cld-9CUB_2 domain-containing protein. (506 aa)    
Predicted Functional Partners:
pks-1
PolyKetide Synthase.
  
 0.839
T01D3.6
Uncharacterized protein.
   
  
 0.838
lec-11
Galectin.
   
  
 0.787
dod-19
Downstream Of DAF-16 (Regulated by DAF-16).
   
  
 0.736
drd-50
Dietary restriction down regulated.
   
 
 0.732
ZK6.11
Uncharacterized protein.
   
  
 0.722
ugt-24
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
 
 0.676
clec-97
C-type lectin domain-containing protein.
      
 0.621
mlt-4
ANK_REP_REGION domain-containing protein.
   
 
 0.608
gst-38
Glutathione S-Transferase.
   
  
 0.602
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.