STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oac-19Acyl_transf_3 domain-containing protein. (698 aa)    
Predicted Functional Partners:
kin-24
Tyrosine-protein kinase.
   
   0.528
acs-18
AMP-binding domain-containing protein.
   
 
 0.455
F44G3.7
Uncharacterized protein; Belongs to the serpin family.
   
   0.452
C18H7.4
Tyrosine-protein kinase.
   
   0.445
pfk-1.2
ATP-dependent 6-phosphofructokinase 2; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
   
   0.433
hdl-2
Histidine Decarboxyase Like.
   
    0.432
F01G10.5
Uncharacterized protein.
   
   0.427
nep-6
NEPrilysin metallopeptidase family.
   
    0.422
F13A7.7
Uncharacterized protein.
   
   0.420
kin-26
Tyrosine-protein kinase.
   
   0.412
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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