STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
his-30Histone H2A. (127 aa)    
Predicted Functional Partners:
his-62
Probable histone H2B 4.
 
 
 
 0.977
his-65
Histone H2A.
  
  
0.968
nap-1
Nucleosome Assembly Protein; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.943
his-43
Histone H2A.
  
  
0.915
his-33
Histone H2A.
  
  
0.912
his-61
Histone H2A.
  
  
0.909
his-3
Histone H2A.
  
  
0.899
his-68
Histone H2A.
  
  
0.886
gly-7
Probable N-acetylgalactosaminyltransferase 7; Probable glycopeptide transferase involved in O-linked oligosaccharide biosynthesis. Glycopeptide transferases catalyze the transfer of an N-acetyl-D-galactosamine residue to an already glycosylated peptide (By similarity). In contrast to other members of the family, it does not act as a peptide transferase that transfers GalNAc onto serine or threonine residue on peptides that have been tested. Some peptide transferase activity is however not excluded, considering that its appropriate peptide substrate may remain unidentified; Belongs to t [...]
      
 0.882
his-19
Histone H2A.
  
  
0.877
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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