Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C16C10.4 | D2005.3 | C16C10.4.1 | D2005.3.1 | Probable histone deacetylase complex subunit SAP18; Acts in transcription repression. Involved in the tethering of the SIN3 complex to core histone proteins (By similarity). Belongs to the SAP18 family. | Uncharacterized protein D2005.3; Belongs to the PDCD5 family. | 0.453 |
C16C10.4 | F35H10.5 | C16C10.4.1 | F35H10.5.2 | Probable histone deacetylase complex subunit SAP18; Acts in transcription repression. Involved in the tethering of the SIN3 complex to core histone proteins (By similarity). Belongs to the SAP18 family. | Uncharacterized protein. | 0.410 |
C16C10.4 | lsm-7 | C16C10.4.1 | ZK593.7.1 | Probable histone deacetylase complex subunit SAP18; Acts in transcription repression. Involved in the tethering of the SIN3 complex to core histone proteins (By similarity). Belongs to the SAP18 family. | Sm domain-containing protein. | 0.664 |
D2005.3 | C16C10.4 | D2005.3.1 | C16C10.4.1 | Uncharacterized protein D2005.3; Belongs to the PDCD5 family. | Probable histone deacetylase complex subunit SAP18; Acts in transcription repression. Involved in the tethering of the SIN3 complex to core histone proteins (By similarity). Belongs to the SAP18 family. | 0.453 |
D2005.3 | F35H10.5 | D2005.3.1 | F35H10.5.2 | Uncharacterized protein D2005.3; Belongs to the PDCD5 family. | Uncharacterized protein. | 0.456 |
D2005.3 | gtf-2H5 | D2005.3.1 | Y55B1AL.2.1 | Uncharacterized protein D2005.3; Belongs to the PDCD5 family. | General Transcription Factor homolog. | 0.413 |
D2005.3 | lsm-7 | D2005.3.1 | ZK593.7.1 | Uncharacterized protein D2005.3; Belongs to the PDCD5 family. | Sm domain-containing protein. | 0.529 |
F35H10.5 | C16C10.4 | F35H10.5.2 | C16C10.4.1 | Uncharacterized protein. | Probable histone deacetylase complex subunit SAP18; Acts in transcription repression. Involved in the tethering of the SIN3 complex to core histone proteins (By similarity). Belongs to the SAP18 family. | 0.410 |
F35H10.5 | D2005.3 | F35H10.5.2 | D2005.3.1 | Uncharacterized protein. | Uncharacterized protein D2005.3; Belongs to the PDCD5 family. | 0.456 |
F35H10.5 | Y48E1C.1 | F35H10.5.2 | Y48E1C.1a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.709 |
F35H10.5 | ZK1127.12 | F35H10.5.2 | ZK1127.12.1 | Uncharacterized protein. | Uncharacterized protein. | 0.455 |
F35H10.5 | emb-1 | F35H10.5.2 | K10D2.4.1 | Uncharacterized protein. | Anaphase-promoting complex subunit emb-1; Probable component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins (By similarity). Developmental role in early embryogenesis and the metaphase to anaphase transition in meiosis and mitosis. May be required for germline proliferation. Required for male tail development and hermaphrodite vulva formation. | 0.454 |
F35H10.5 | fcd-2 | F35H10.5.2 | Y41E3.9a.1 | Uncharacterized protein. | FANCD2 (Fanconi's anemia defect) ortholog. | 0.900 |
F35H10.5 | fnci-1 | F35H10.5.2 | W02D3.10.1 | Uncharacterized protein. | FANCI_HD2 domain-containing protein. | 0.900 |
F35H10.5 | gtf-2H5 | F35H10.5.2 | Y55B1AL.2.1 | Uncharacterized protein. | General Transcription Factor homolog. | 0.418 |
F35H10.5 | lsm-7 | F35H10.5.2 | ZK593.7.1 | Uncharacterized protein. | Sm domain-containing protein. | 0.422 |
F35H10.5 | mxl-1 | F35H10.5.2 | T19B10.11.1 | Uncharacterized protein. | BHLH domain-containing protein. | 0.538 |
Y48E1C.1 | F35H10.5 | Y48E1C.1a.1 | F35H10.5.2 | Uncharacterized protein. | Uncharacterized protein. | 0.709 |
ZK1127.12 | F35H10.5 | ZK1127.12.1 | F35H10.5.2 | Uncharacterized protein. | Uncharacterized protein. | 0.455 |
emb-1 | F35H10.5 | K10D2.4.1 | F35H10.5.2 | Anaphase-promoting complex subunit emb-1; Probable component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins (By similarity). Developmental role in early embryogenesis and the metaphase to anaphase transition in meiosis and mitosis. May be required for germline proliferation. Required for male tail development and hermaphrodite vulva formation. | Uncharacterized protein. | 0.454 |
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