STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc-11Rab-GAP TBC domain-containing protein. (934 aa)    
Predicted Functional Partners:
rab-6.1
Ras-related protein Rab-6.1; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.
    
 0.852
rab-6.2
Ras-related protein Rab-6.2; Protein transport. Probably involved in vesicular traffic (By similarity).
   
 0.825
tbc-13
Rab-GAP TBC domain-containing protein.
   
  
 0.709
tbc-8
Rab-GAP TBC domain-containing protein.
   
  
 0.700
tram-1
Translocating chain-associated membrane protein; Belongs to the TRAM family.
      
 0.660
rab-11.2
RAB family.
    
 
 0.660
rab-19
RAB family.
   
 
 0.626
tbc-20
Rab-GAP TBC domain-containing protein.
      
 0.612
tbc-3
Rab-GAP TBC domain-containing protein.
    
 
 0.567
tbc-14
Rab-GAP TBC domain-containing protein.
      
 0.547
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.